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Automated threshold-independent cortex segmentation by 3D-texture analysis of HR-pQCT scans.

Abstract

The quantitative assessment of metabolic bone diseases relies on tissue properties such as bone mineral density (BMD) and bone microarchitecture. In spite of an increasing number of publications using high-resolution peripheral quantitative computed-tomography (HR-pQCT), the accurate and reproducible separation of cortical and trabecular bone remains challenging. In this paper, we present a novel, fully automated, threshold-independent technique for the segmentation of cortical and trabecular bone in HR-pQCT scans. This novel post-processing method is based on modeling appearance characteristics from manually annotated cases. In our experiments the algorithm automatically selected texture features with high differentiating power and trained a classifier to separate cortical and trabecular bone. From this mask, cortical thickness and tissue volume could be calculated with high accuracy. The overlap between the proposed threshold-independent segmentation tool (TIST) and manual contouring was 0.904±0.045 (Dice coefficient). In our experiments, TIST obtained higher overall accuracy in our measurements than other techniques.

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  • Publisher Full Text
  • Authors

    Valentinitsch A, Patsch JM, Deutschmann J, Schueller-Weidekamm C, Resch H, Kainberger F, Langs G

    Institution

    Computational Image Analysis and Radiology Lab, Department of Radiology, Medical University of Vienna, 1090 Vienna, Austria. alexander.valentinitsch@meduniwien.ac.at

    Source

    Bone 51:3 2012 Sep pg 480-7

    MeSH

    Aged
    Aged, 80 and over
    Algorithms
    Automation
    Female
    Humans
    Imaging, Three-Dimensional
    Male
    Middle Aged
    Organ Size
    Radius
    Regression Analysis
    Tissue Donors
    Tomography, X-Ray Computed

    Pub Type(s)

    Journal Article
    Research Support, Non-U.S. Gov't

    Language

    eng

    PubMed ID

    22705149