- Clostridium butyricum-derived extracellular vesicles alleviate ETEC K88-induced intestinal injury by regulating Wnt/β-catenin signaling and gut microbiota. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0042426. [Online ahead of print]AE
- Probiotic-derived extracellular vesicles (EVs) serve as crucial mediators that alleviate intestinal barrier dysfunction. As a well-established probiotic, Clostridium butyricum (Cb) has been shown to ameliorate ETEC K88-induced intestinal injury. Nevertheless, the potential role of Cb-derived EVs (CbEVs) in ETEC K88-induced intestinal injury has not yet been elucidated. This study showed that CbEV…
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- Carbon and nitrogen availability affects biofilm growth and morphology of the extremotolerant fungus Knufia petricola. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0065626. [Online ahead of print]AE
- Rock-inhabiting fungi thrive in subaerial oligotrophic environments, such as desert rocks, solar panels, and marble monuments, where organic carbon and nitrogen are scarce. We tested whether the rock-inhabiting fungus Knufia petricola showed a preference regarding nitrogen ([Formula: see text] or [Formula: see text]) and carbon (glucose or sucrose) sources, and whether it was sensitive toward car…
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- Host-derived stimuli alter intracellular calcium levels in Pseudomonas aeruginosa, revealing its potential role as a second messenger. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0135926. [Online ahead of print]AE
- Calcium signaling is a fundamental cellular communication mechanism, well established in eukaryotes, that relies on calcium ions (Ca2+) acting both as first and second messengers to regulate diverse life-sustaining processes. In bacteria, although the significance of Ca2+ regulation is recognized, it is commonly attributed to its role as a first messenger, while the mechanistic basis for its capa…
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- A capsid hinge region in European hepatitis E virus links mutations to genotype, virion surface properties, and environmental circulation. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0144526. [Online ahead of print]AE
- Hepatitis E virus (HEV) exhibits genetic diversity associated with distinct public health outcomes and circulation patterns across interconnected human and environmental reservoirs. Most studies have focused on genome-wide diversity, revealing relationships between genotype, virulence, and dissemination routes. However, the role of localized mutations in the capsid protein (ORF2), which may influ…
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- Top-down/bottom-up consortia achieve robust γ-HCH degradation and reduced methanogenic contribution in wetlands. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0113326. [Online ahead of print]AE
- Generalist non-obligate organochlorine-degrading bacteria (ODB) play an important role in the bioremediation of γ-hexachlorocyclohexane (γ-HCH), yet their ecological roles and functional mechanisms remain underexplored. In this study, we used both "top-down" and "bottom-up" strategies to construct two functional consortia (M and Y13) based on non-obligate ODB. Both consortia demonstrated efficien…
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- Influence of polyvinyl chloride (PVC) microplastic morphology on bacterial survival during thermal and ultraviolet-C inactivation in aqueous systems. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0102526. [Online ahead of print]AE
- Microplastics are increasingly detected in water and food-associated environments, yet how particle morphology influences microbial persistence during inactivation remains poorly understood. This study aims to develop polyvinyl chloride (PVC) microplastic particles with distinct morphologies and controlled size ranges, and to evaluate how particle morphology influences bacterial attachment and su…
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- Diversification of biofilm architecture among freshwater Pararheinheimera isolates. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0040026. [Online ahead of print]AE
- Extracellular matrices that scaffold microbial biofilms offer a rich source of polymeric materials with a range of potential applications. However, our understanding of these matrices is largely restricted to model organisms that form biofilms with specific architectures. Examining biofilms from understudied niches has the potential to identify extracellular matrices with novel properties. Here, …
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- Semi-automated strain engineering and screening in the thermophilic fungus Myceliophthora thermophila for recombinant protein production. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0099526. [Online ahead of print]AE
- Thermophilic filamentous fungi are widely used for cellulase production at elevated temperatures; however, efficient recombinant protein production in these organisms remains limited because construction and screening of large transformant populations remain difficult. Here, Myceliophthora thermophila was engineered into a thermophilic fungal chassis through combinatorial deletion of genes associ…
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- Environmental microbial community signatures associated with Listeria spp. detection in German meat processing facilities. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0104226. [Online ahead of print]AE
- Listeria monocytogenes can persist in niches of meat processing environments despite routine cleaning and disinfection. Its persistence may depend not only on stress tolerance but also on interactions with resident microbial communities, which may promote or inhibit survival. However, these ecological relationships remain poorly understood. We combined 16S rRNA V3/V4 amplicon sequencing, culture-…
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- Rapid detection of cultivated truffle fungi (Tuber) from truffles and ectomycorrhizal root tips using loop-mediated isothermal amplification. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0155926. [Online ahead of print]AE
- Truffle fungi, such as Tuber melanosporum and T. aestivum, are prized luxury food products that have been historically cultivated in Mediterranean regions of Europe. Recent advances in truffle cultivation have led to the establishment of productive truffle orchards in North America, South America, China, and Australia. Despite these advances, a consistent issue has been the introduction and accid…
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- Fine-scale structural diversification among closely related Legionella pneumophila isolates from a bath-associated environmental reservoir. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0112726. [Online ahead of print]AE
- Legionella pneumophila populations within environmental reservoirs can exhibit genomic diversity, complicating source attribution during outbreak investigations. Core genome single-nucleotide variant (cgSNV)-based approaches are widely used for identifying closely related lineages during molecular epidemiological investigations; however, they primarily focus on nucleotide-level variation and may …
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- Light-induced carotenogenesis enhances growth and high hydrostatic pressure tolerance in a deep-sea bacterium by reducing intracellular ROS. [Journal Article]Appl Environ Microbiol. 2026 Aug 28; :e0065826. [Online ahead of print]AE
- Deep-sea hydrothermal vents emit geothermal light, yet its ecological role in shaping microbial adaptation remains largely unexplored. To investigate this, we designed a custom cultivation system that simultaneously applies high hydrostatic pressure (HHP) and light and used it to isolate 12 bacterial strains from active chimney fragments collected at the Kairei hydrothermal field. All 12 isolates…
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- Distinct roles of PilI and ChpC in Pseudomonas aeruginosa Chp chemosensory array architecture. [Journal Article]Appl Environ Microbiol. 2026 Aug 27; :e0128626. [Online ahead of print]AE
- Bacteria integrate environmental signals through chemosensory systems to coordinate chemotaxis and make lifestyle decisions, such as surface attachment and biofilm formation. The core sensory complex consists of three essential components: chemoreceptors, histidine kinases, and adaptor proteins. Together, these proteins form extended arrays that result in efficient signal transduction. The Chp ch…
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- A dual methane production mechanism mediated by enzymatic catalysis and the Fenton reaction in the wood-rotting fungus Schizophyllum commune. [Journal Article]Appl Environ Microbiol. 2026 Aug 27; :e0129826. [Online ahead of print]AE
- Understanding biological sources of methane is critical for elucidating the global methane cycle and addressing climate change. While traditional research has predominantly focused on prokaryotic methanogens, emerging evidence suggests that eukaryotes, particularly fungi, can produce methane through both enzymatic and non-enzymatic pathways. However, no eukaryotic organism has been documented to …
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- The urinary tract commensal Peptoniphilus spp. encodes a novel 17β-hydroxysteroid dehydrogenase. [Journal Article]Appl Environ Microbiol. 2026 Aug 27; :e0062326. [Online ahead of print]AE
- Microbial steroid metabolism represents an underappreciated extension of the vertebrate endocrine system, with growing evidence that host-associated microbes contribute to the diversity and bioavailability of sex steroids to human tissues. Emerging studies have linked microbial androgen metabolism to urinary microbiome composition and to resistance to androgen deprivation therapy (ADT) in prostat…
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