- Intra-individual genetic diversity of vaginal Lactobacillus crispatus revealed through citizen science-driven isolation and pangenome analysis. [Journal Article]J Appl Microbiol. 2026 Sep 04. [Online ahead of print]JA
- CONCLUSIONS: Substantial functional diversity exists within L. crispatus, even among strains from the same individual, supporting the rationale for multi-strain vaginal probiotics. This citizen science approach enabled discovery of host-specific adaptations while ensuring participant ownership of their strains.
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- Rethinking escape frequency benchmarks for environmental applications of engineered microorganisms. [Journal Article]J Appl Microbiol. 2026 Sep 03. [Online ahead of print]JA
- Biological containment strategies are widely used to reduce possible risks associated with genetically modified microorganisms (GMMs). In the biosafety literature, the performance of these systems is often benchmarked against a maximum escape frequency of one cell per 108 cells. This value is commonly attributed to the USA National Institutes of Health Guidelines for Research Involving Recombinan…
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- Integration of Genome Mining and HiTES Reveals Secondary Metabolic Potential in Marine-Derived Aspergillus sp. WHUF0304. [Journal Article]J Appl Microbiol. 2026 Sep 03. [Online ahead of print]JA
- CONCLUSIONS: These findings demonstrate that integrating genomic and functional approaches effectively activates silent BGCs in marine fungi. The fluconazole-associated accumulation and subsequent isolation of cristatumin E, a bioactive indole diketopiperazine dimer, highlight the potential of elicitor-mediated activation to expand the detectable metabolite profile of Aspergillus sp. WHUF0304.
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- Isolation and characterization of Bacillus stratosphericus K as a sustainable probiotic for biocontrol of Edwardsiella ictaluri in Pelteobagrus fulvidraco aquaculture. [Journal Article]J Appl Microbiol. 2026 Sep 01. [Online ahead of print]JA
- CONCLUSIONS: B. stratosphericus K was found to be a promising probiotic candidate with significant protective effects against E. ictaluri infection in P. fulvidraco aquaculture, highlighting its potential for sustainable disease management.
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- Constructed wetland treatment increases prevalence of multidrug-resistant Escherichia coli isolates but decreases overall concentrations. [Journal Article]J Appl Microbiol. 2026 Aug 31. [Online ahead of print]JA
- CONCLUSIONS: We observed limited removal of ARB, but an increase in the proportion of MDR isolates in the later treatment stages is concerning, as it suggests that the BCW may be acting as a reservoir and a possible conduit for evolution of MDR pathogens.
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- Microbial dysbiosis exacerbates exercise fatigue in mice under hypobaric hypoxia. [Journal Article]J Appl Microbiol. 2026 Aug 31. [Online ahead of print]JA
- CONCLUSIONS: Hypobaric hypoxia rapidly remodels the intestinal microbiota, and these microbial alterations contribute to oxidative stress, intestinal barrier dysfunction, and reduced exercise capacity under hypoxic conditions. FMT supports a contributory role of the intestinal microbiota in hypoxia-associated physiological dysfunction while indicating that hypoxic stress remains necessary for the full fatigue phenotype to develop. These findings support further investigation of microbiota-targeted strategies to mitigate exercise impairment during hypobaric hypoxia.
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- Complementary detection of respiratory pathogens and antimicrobial-resistance markers by multiplex PCR alongside culture in a High-AMR Egyptian cohort. [Journal Article]J Appl Microbiol. 2026 Aug 31. [Online ahead of print]JA
- CONCLUSIONS: Integration of multiplex PCR and conventional culture expanded pathogen detection and provided valuable AMR profiling in resource-limited, high-resistance settings.
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- LAMP-CRISPR Integrated Platforms for Rapid Detection of Microbial Pathogens: Principles, Applied Strategies, and the Road to Field Translation. [Journal Article]J Appl Microbiol. 2026 Aug 31. [Online ahead of print]JA
- Loop-mediated isothermal amplification (LAMP) integrated with CRISPR-Cas systems has emerged as a promising molecular diagnostic platform for the rapid detection of microbial pathogens. By combining the efficient nucleic acid amplification of LAMP with the sequence-specific recognition capability of CRISPR-Cas effectors, these platforms offer potential advantages in analytical sensitivity, specif…
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- Manipulation of rhizosphere microbiome by Microbacterium sp. GB16_1_BI to promote plant growth. [Journal Article]J Appl Microbiol. 2026 Aug 31. [Online ahead of print]JA
- CONCLUSIONS: Microbes dwelling in the rhizosphere contributes to the biogeochemical cycle by transforming unavailable minerals and by retaining nutrients for its growth which get released after death for plant adsorption. However, not all microbes contribute positively to plant growth. Microbes compete with plants for nutrients, cause disease or produce harmful greenhouse gases. Hence, GB16_1_BI could influence plant growth predominantly by suppressing microbes and encouraged niche-specific microbes specifically involved in nitrogen cycling.
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- Carvacrol thymol formulation: bactericidal activity without detectable early resistance induction in Gram-positive and Gram-negative bacteria. [Journal Article]J Appl Microbiol. 2026 Aug 29. [Online ahead of print]JA
- CONCLUSIONS: These findings indicate that carvacrol-thymol synergy provides bactericidal activity without detectable early resistance induction in the short-term exposure model used here. Although further studies using clinical and multidrug-resistant isolates, longer serial passaging, and mechanistic assays are required, the results support the potential of natural bioactive combinations as candidates for alternative antimicrobial strategies.
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- Antibacterial and antibiofilm effects of immobilized hydrogen on pathogenic oral bacteria. [Journal Article]J Appl Microbiol. 2026 Aug 27. [Online ahead of print]JA
- CONCLUSIONS: This study highlights the potential of immobilized hydrogen as a novel antibacterial material, owing to its antibacterial and antibiofilm activities against pathogenic oral bacteria.
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- Rapid and Femtogram-level Sensitive Detection of Blastocystis spp. Using Colorimetric and Fluorometric LAMP Assays: Analytical and Clinical Validation. [Journal Article]J Appl Microbiol. 2026 Aug 26. [Online ahead of print]JA
- CONCLUSIONS: This study introduces a dual-platform LAMP system offering femtogram-level sensitivity and rapid detection of Blastocystis spp. within 30 minutes following DNA extraction. While fLAMP provides high-precision diagnostic accuracy, cLAMP offers an accessible, visual screening tool well-suited for low-resource environments.
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- Bentonite compaction shapes microbial communities but abiotic processes dominate carbon steel corrosion in repository conditions. [Journal Article]J Appl Microbiol. 2026 Aug 26. [Online ahead of print]JA
- CONCLUSIONS: Under the investigated conditions, bentonite compaction restricted microbial activity and suppressed many candidate MIC taxa but did not suppress abiotic corrosion. Corrosion rates were often lower in biotic than in sterile treatments, indicating that microbial activity may, under certain conditions, mitigate corrosion and should be considered alongside corrosion-promoting processes when evaluating repository-relevant bentonite systems.
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- The "One-Two Punch": A conceptual analysis of nisin and lysozyme synergy against Listeria monocytogenes biofilms and their dependence on environmental factors. [Journal Article]J Appl Microbiol. 2026 Aug 26. [Online ahead of print]JA
- CONCLUSIONS: The "One-Two Punch" model provides a mechanistically grounded framework for combining natural antimicrobials to target resilient L. monocytogenes biofilms. Key environmental constraints, critical knowledge gaps, and directions for experimental validation are outlined, providing a foundation for designing more effective biofilm control strategies across diverse food industry settings.
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- Evaluation of phage-antibiotic combinations in the inactivation of urinary tract infection-related bacteria. [Journal Article]J Appl Microbiol. 2026 Aug 22. [Online ahead of print]JA
- CONCLUSIONS: Phage-antibiotic combination therapy improves bacterial killing, suppresses resistance emergence, and remains effective in urine-based models. These findings support integrating phage therapy with conventional antibiotics as a promising strategy for UTI management.
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