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Trajectory approach to two-state kinetics of single particles on sculpted energy landscapes. Physical review letters [Phys Rev Lett] Journal article

 
Wu D, Ghosh K, Inamdar M, Lee HJ, Fraser S, Dill K, Phillips R 
Trajectory approach to two-state kinetics of single particles on sculpted energy landscapes. [Journal Article]
Phys Rev Lett 2009 Jul 31; 103(5):050603.


We study the trajectories of a single colloidal particle as it hops between two energy wells which are sculpted using optical traps. Whereas the dynamical behaviors of such systems are often treated by master-equation methods that focus on particles as actors, we analyze them instead using a trajectory-based variational method called maximum caliber (MaxCal). We show that the MaxCal strategy accurately predicts the full dynamics that we observe in the experiments: From the observed averages, it predicts second and third moments and covariances, with no free parameters. The covariances are the dynamical equivalents of Maxwell-like equilibrium reciprocal relations and Onsager-like dynamical relations.



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