Tags

Type your tag names separated by a space and hit enter

Integrated approach for segmentation of 3-D confocal images of a tissue specimen.
Microsc Res Tech. 2001 Aug 15; 54(4):260-70.MR

Abstract

In this article we have proposed an integrated approach for segmentation of cells in volumetric image data obtained using the Confocal Microscope. The volumetric images are the stack of two-dimensional (2-D) images. Segmentation of cells in such an image stack is a difficult problem due to the complex structure of the objects and the spatial relationship of the object signatures in different image slices of the image stack. Here we have proposed a segmentation technique, which is a combination of several known and novel segmentation methods. Low-level techniques such as edge operators, middle-level techniques such as 3-D watershed, rule-based merging, and a high level technique, active surface model optimization, are integrated in one approach to get better segmentation with less human interaction. Some image enhancement and noise reduction techniques are also used to reduce the error in intermediate stages and speed up the segmentation process. Results are shown on 3-D images of prostate cancer tissue specimen.

Authors+Show Affiliations

Indian Statistical Institute, Calcutta, India. umesh.adiga@well.ox.ac.uk

Pub Type(s)

Journal Article

Language

eng

PubMed ID

11514982

Citation

Adiga, P S.. "Integrated Approach for Segmentation of 3-D Confocal Images of a Tissue Specimen." Microscopy Research and Technique, vol. 54, no. 4, 2001, pp. 260-70.
Adiga PS. Integrated approach for segmentation of 3-D confocal images of a tissue specimen. Microsc Res Tech. 2001;54(4):260-70.
Adiga, P. S. (2001). Integrated approach for segmentation of 3-D confocal images of a tissue specimen. Microscopy Research and Technique, 54(4), 260-70.
Adiga PS. Integrated Approach for Segmentation of 3-D Confocal Images of a Tissue Specimen. Microsc Res Tech. 2001 Aug 15;54(4):260-70. PubMed PMID: 11514982.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Integrated approach for segmentation of 3-D confocal images of a tissue specimen. A1 - Adiga,P S, PY - 2001/8/22/pubmed PY - 2002/3/1/medline PY - 2001/8/22/entrez SP - 260 EP - 70 JF - Microscopy research and technique JO - Microsc Res Tech VL - 54 IS - 4 N2 - In this article we have proposed an integrated approach for segmentation of cells in volumetric image data obtained using the Confocal Microscope. The volumetric images are the stack of two-dimensional (2-D) images. Segmentation of cells in such an image stack is a difficult problem due to the complex structure of the objects and the spatial relationship of the object signatures in different image slices of the image stack. Here we have proposed a segmentation technique, which is a combination of several known and novel segmentation methods. Low-level techniques such as edge operators, middle-level techniques such as 3-D watershed, rule-based merging, and a high level technique, active surface model optimization, are integrated in one approach to get better segmentation with less human interaction. Some image enhancement and noise reduction techniques are also used to reduce the error in intermediate stages and speed up the segmentation process. Results are shown on 3-D images of prostate cancer tissue specimen. SN - 1059-910X UR - https://www.unboundmedicine.com/medline/citation/11514982/Integrated_approach_for_segmentation_of_3_D_confocal_images_of_a_tissue_specimen_ L2 - https://doi.org/10.1002/jemt.1138 DB - PRIME DP - Unbound Medicine ER -