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Pseudo-merohedral twinning in monoclinic crystals of human orotidine-5'-monophosphate decarboxylase.
Acta Crystallogr D Biol Crystallogr. 2007 Jun; 63(Pt 6):744-9.AC

Abstract

Human UMP synthase is a bifunctional enzyme that catalyzes the penultimate and last steps in the de novo biosynthesis of UMP. In contrast to prokaryotes, UMP synthase from higher eukaryotes combines the orotate phosphoribosyltransferase and the orotidine-5'-monophosphate (OMP) decarboxylase activities on a single polypeptide chain. The decarboxylase activity is unusual in that it represents the fastest rate acceleration of any enzyme studied to date. Although several crystal structures of OMP decarboxylases have been described, the precise decarboxylation mechanism remains elusive. The crystal structure of the OMP decarboxylase domain from human UMP synthase was determined by molecular replacement using data from a highly twinned monoclinic crystal. The space group is P2(1), with unit-cell parameters a = 69.18, b = 61.70, c = 69.17 A, beta = 113.06 degrees. Self-rotation function analysis and various intensity statistics revealed the presence of pseudo-merohedral twinning, but these tests underestimated the true twin fraction of alpha approximately = 0.44. Data analysis, the origin of the twinning and structure determination are discussed.

Authors+Show Affiliations

Department of Molecular Structural Biology, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.No affiliation info available

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

17505114

Citation

Wittmann, Julia G., and Markus G. Rudolph. "Pseudo-merohedral Twinning in Monoclinic Crystals of Human Orotidine-5'-monophosphate Decarboxylase." Acta Crystallographica. Section D, Biological Crystallography, vol. 63, no. Pt 6, 2007, pp. 744-9.
Wittmann JG, Rudolph MG. Pseudo-merohedral twinning in monoclinic crystals of human orotidine-5'-monophosphate decarboxylase. Acta Crystallogr D Biol Crystallogr. 2007;63(Pt 6):744-9.
Wittmann, J. G., & Rudolph, M. G. (2007). Pseudo-merohedral twinning in monoclinic crystals of human orotidine-5'-monophosphate decarboxylase. Acta Crystallographica. Section D, Biological Crystallography, 63(Pt 6), 744-9.
Wittmann JG, Rudolph MG. Pseudo-merohedral Twinning in Monoclinic Crystals of Human Orotidine-5'-monophosphate Decarboxylase. Acta Crystallogr D Biol Crystallogr. 2007;63(Pt 6):744-9. PubMed PMID: 17505114.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Pseudo-merohedral twinning in monoclinic crystals of human orotidine-5'-monophosphate decarboxylase. AU - Wittmann,Julia G, AU - Rudolph,Markus G, Y1 - 2007/05/15/ PY - 2007/02/27/received PY - 2007/04/03/accepted PY - 2007/5/17/pubmed PY - 2007/8/7/medline PY - 2007/5/17/entrez SP - 744 EP - 9 JF - Acta crystallographica. Section D, Biological crystallography JO - Acta Crystallogr D Biol Crystallogr VL - 63 IS - Pt 6 N2 - Human UMP synthase is a bifunctional enzyme that catalyzes the penultimate and last steps in the de novo biosynthesis of UMP. In contrast to prokaryotes, UMP synthase from higher eukaryotes combines the orotate phosphoribosyltransferase and the orotidine-5'-monophosphate (OMP) decarboxylase activities on a single polypeptide chain. The decarboxylase activity is unusual in that it represents the fastest rate acceleration of any enzyme studied to date. Although several crystal structures of OMP decarboxylases have been described, the precise decarboxylation mechanism remains elusive. The crystal structure of the OMP decarboxylase domain from human UMP synthase was determined by molecular replacement using data from a highly twinned monoclinic crystal. The space group is P2(1), with unit-cell parameters a = 69.18, b = 61.70, c = 69.17 A, beta = 113.06 degrees. Self-rotation function analysis and various intensity statistics revealed the presence of pseudo-merohedral twinning, but these tests underestimated the true twin fraction of alpha approximately = 0.44. Data analysis, the origin of the twinning and structure determination are discussed. SN - 0907-4449 UR - https://www.unboundmedicine.com/medline/citation/17505114/Pseudo_merohedral_twinning_in_monoclinic_crystals_of_human_orotidine_5'_monophosphate_decarboxylase_ L2 - http://scripts.iucr.org/cgi-bin/paper?S0907444907016605 DB - PRIME DP - Unbound Medicine ER -