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Identification of potent virtual leads to design novel indoleamine 2,3-dioxygenase inhibitors: pharmacophore modeling and molecular docking studies.
Eur J Med Chem. 2010 Sep; 45(9):4004-12.EJ

Abstract

Indoleamine 2,3-dioxygenase, a heme-containing enzyme, is emerging as a vital target for the treatment of cancer, chronic viral infections, and other diseases. The aim of this study is to identify novel scaffolds and utilize them in designing potent IDO inhibitors. Pharmacophore hypotheses were developed. The highly correlating (r = 0.958) hypothesis with two hydrogen bond acceptor, one hydrogen bond donor and one hydrophobic aromatic features was selected, validated and used in virtual screening. Hit compounds were subjected to various drug-like filtrations and molecular docking studies. Finally, three structurally diverse compounds with high GOLD fitness scores and interactions with critical active site amino acids were identified. These final hits may act as potent virtual leads in effective IDO inhibitor designing.

Authors+Show Affiliations

Department of Biochemistry and Division of Applied Life Science (BK21 Program), Environmental Biotechnology National Core Research Center, Gyeongsang National University, 900 Gazwa-dong, Jinju 660-701, Republic of Korea.No affiliation info availableNo affiliation info availableNo affiliation info available

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

20580138

Citation

John, Shalini, et al. "Identification of Potent Virtual Leads to Design Novel Indoleamine 2,3-dioxygenase Inhibitors: Pharmacophore Modeling and Molecular Docking Studies." European Journal of Medicinal Chemistry, vol. 45, no. 9, 2010, pp. 4004-12.
John S, Thangapandian S, Sakkiah S, et al. Identification of potent virtual leads to design novel indoleamine 2,3-dioxygenase inhibitors: pharmacophore modeling and molecular docking studies. Eur J Med Chem. 2010;45(9):4004-12.
John, S., Thangapandian, S., Sakkiah, S., & Lee, K. W. (2010). Identification of potent virtual leads to design novel indoleamine 2,3-dioxygenase inhibitors: pharmacophore modeling and molecular docking studies. European Journal of Medicinal Chemistry, 45(9), 4004-12. https://doi.org/10.1016/j.ejmech.2010.05.057
John S, et al. Identification of Potent Virtual Leads to Design Novel Indoleamine 2,3-dioxygenase Inhibitors: Pharmacophore Modeling and Molecular Docking Studies. Eur J Med Chem. 2010;45(9):4004-12. PubMed PMID: 20580138.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Identification of potent virtual leads to design novel indoleamine 2,3-dioxygenase inhibitors: pharmacophore modeling and molecular docking studies. AU - John,Shalini, AU - Thangapandian,Sundarapandian, AU - Sakkiah,Sugunadevi, AU - Lee,Keun Woo, Y1 - 2010/06/02/ PY - 2010/02/14/received PY - 2010/04/09/revised PY - 2010/05/26/accepted PY - 2010/6/29/entrez PY - 2010/6/29/pubmed PY - 2010/12/14/medline SP - 4004 EP - 12 JF - European journal of medicinal chemistry JO - Eur J Med Chem VL - 45 IS - 9 N2 - Indoleamine 2,3-dioxygenase, a heme-containing enzyme, is emerging as a vital target for the treatment of cancer, chronic viral infections, and other diseases. The aim of this study is to identify novel scaffolds and utilize them in designing potent IDO inhibitors. Pharmacophore hypotheses were developed. The highly correlating (r = 0.958) hypothesis with two hydrogen bond acceptor, one hydrogen bond donor and one hydrophobic aromatic features was selected, validated and used in virtual screening. Hit compounds were subjected to various drug-like filtrations and molecular docking studies. Finally, three structurally diverse compounds with high GOLD fitness scores and interactions with critical active site amino acids were identified. These final hits may act as potent virtual leads in effective IDO inhibitor designing. SN - 1768-3254 UR - https://www.unboundmedicine.com/medline/citation/20580138/Identification_of_potent_virtual_leads_to_design_novel_indoleamine_23_dioxygenase_inhibitors:_pharmacophore_modeling_and_molecular_docking_studies_ L2 - https://linkinghub.elsevier.com/retrieve/pii/S0223-5234(10)00428-9 DB - PRIME DP - Unbound Medicine ER -