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The complete mitochondrial genome of Chinese rare minnow, Gobiocypris rarus (Teleostei: Cypriniformes).
Mitochondrial DNA. 2011 Oct; 22(5-6):178-80.MD

Abstract

The Chinese rare minnow, Gobiocypris rarus, which is endemic to China, is an attractive aquatic laboratory animal in China. In the present study, the complete mitogenome sequence of G. rarus has been determined using long polymerase chain reaction (PCR) method. It was 16,601 bp in length and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region, the gene composition and order of which are similar to most other vertebrates. Except for eight tRNA and ND6 genes, all other mitochondrial genes are encoded on the heavy strand. The overall base composition of the heavy strand is 29.5% A, 27.6% T, 25.7% C, and 17.2% G, with a slight AT bias of 57.1%. There are 10 regions of gene overlap totaling 27 bp and 13 intergenic spacer regions totaling 63 bp. The mitogenome sequence of G. rarus could contribute to a better solution of its phylogenetic position within cyprinid fishes based on the whole mitogenomic data.

Authors+Show Affiliations

The Key Laboratory of Freshwater Fish Reproduction and Development (Ministry of Education), Southwest University, Beibei, Chongqing, PR China.No affiliation info availableNo affiliation info availableNo affiliation info available

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

22165834

Citation

Wang, Jinjin, et al. "The Complete Mitochondrial Genome of Chinese Rare Minnow, Gobiocypris Rarus (Teleostei: Cypriniformes)." Mitochondrial DNA, vol. 22, no. 5-6, 2011, pp. 178-80.
Wang J, Li P, Zhang Y, et al. The complete mitochondrial genome of Chinese rare minnow, Gobiocypris rarus (Teleostei: Cypriniformes). Mitochondrial DNA. 2011;22(5-6):178-80.
Wang, J., Li, P., Zhang, Y., & Peng, Z. (2011). The complete mitochondrial genome of Chinese rare minnow, Gobiocypris rarus (Teleostei: Cypriniformes). Mitochondrial DNA, 22(5-6), 178-80. https://doi.org/10.3109/19401736.2011.636441
Wang J, et al. The Complete Mitochondrial Genome of Chinese Rare Minnow, Gobiocypris Rarus (Teleostei: Cypriniformes). Mitochondrial DNA. 2011;22(5-6):178-80. PubMed PMID: 22165834.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - The complete mitochondrial genome of Chinese rare minnow, Gobiocypris rarus (Teleostei: Cypriniformes). AU - Wang,Jinjin, AU - Li,Ping, AU - Zhang,Yaoguang, AU - Peng,Zuogang, PY - 2011/12/15/entrez PY - 2011/12/15/pubmed PY - 2012/6/28/medline SP - 178 EP - 80 JF - Mitochondrial DNA JO - Mitochondrial DNA VL - 22 IS - 5-6 N2 - The Chinese rare minnow, Gobiocypris rarus, which is endemic to China, is an attractive aquatic laboratory animal in China. In the present study, the complete mitogenome sequence of G. rarus has been determined using long polymerase chain reaction (PCR) method. It was 16,601 bp in length and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region, the gene composition and order of which are similar to most other vertebrates. Except for eight tRNA and ND6 genes, all other mitochondrial genes are encoded on the heavy strand. The overall base composition of the heavy strand is 29.5% A, 27.6% T, 25.7% C, and 17.2% G, with a slight AT bias of 57.1%. There are 10 regions of gene overlap totaling 27 bp and 13 intergenic spacer regions totaling 63 bp. The mitogenome sequence of G. rarus could contribute to a better solution of its phylogenetic position within cyprinid fishes based on the whole mitogenomic data. SN - 1940-1744 UR - https://www.unboundmedicine.com/medline/citation/22165834/The_complete_mitochondrial_genome_of_Chinese_rare_minnow_Gobiocypris_rarus__Teleostei:_Cypriniformes__ L2 - https://www.tandfonline.com/doi/full/10.3109/19401736.2011.636441 DB - PRIME DP - Unbound Medicine ER -