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Genome-wide analysis and environmental response profiling of the FK506-binding protein gene family in maize (Zea mays L.).
Gene. 2012 May 01; 498(2):212-22.GENE

Abstract

The FK506-binding proteins (FKBPs) belong to the peptidyl-prolyl cis/trans isomerase (PPIase) superfamily, and have been implicated in a wide spectrum of biological processes, including protein folding, hormone signaling, plant growth, and stress responses. Genome-wide structural and evolutionary analyses of the entire FKBP gene family have been conducted in Arabidopsis and rice. In the present study, a genome-wide analysis was performed to identify all maize FKBP genes. The availability of complete maize genome sequences allowed for the identification of 24 FKBP genes. Chromosomal locations in the maize genome were determined and the protein domain and motif organization of ZmFKBPs analyzed. The phylogenetic relationships between maize FKBPs were also assessed. The expression profiles of ZmFKBP genes were measured under different environmental conditions and revealed distinct ZmFKBP gene expression patterns under heat, cold, salt, and drought stress. These data not only contribute to a better understanding of the complex regulation of the maize FKBP gene family, but also provide evidence supporting the role of FKBPs in multiple signaling pathways involved in stress responses. This investigation may provide valuable information for further research on stress tolerance in plants and potential strategies for enhancing maize survival under stressful conditions.

Authors+Show Affiliations

Maize Institute, Shandong Academy of Agricultural Sciences/National Maize Improvement Sub-Center, Jinan, Shandong 250100, PR China. lily_yu74@hotmail.comNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info available

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

22366304

Citation

Yu, Yanli, et al. "Genome-wide Analysis and Environmental Response Profiling of the FK506-binding Protein Gene Family in Maize (Zea Mays L.)." Gene, vol. 498, no. 2, 2012, pp. 212-22.
Yu Y, Zhang H, Li W, et al. Genome-wide analysis and environmental response profiling of the FK506-binding protein gene family in maize (Zea mays L.). Gene. 2012;498(2):212-22.
Yu, Y., Zhang, H., Li, W., Mu, C., Zhang, F., Wang, L., & Meng, Z. (2012). Genome-wide analysis and environmental response profiling of the FK506-binding protein gene family in maize (Zea mays L.). Gene, 498(2), 212-22. https://doi.org/10.1016/j.gene.2012.01.094
Yu Y, et al. Genome-wide Analysis and Environmental Response Profiling of the FK506-binding Protein Gene Family in Maize (Zea Mays L.). Gene. 2012 May 1;498(2):212-22. PubMed PMID: 22366304.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Genome-wide analysis and environmental response profiling of the FK506-binding protein gene family in maize (Zea mays L.). AU - Yu,Yanli, AU - Zhang,Hui, AU - Li,Wencai, AU - Mu,Chunhua, AU - Zhang,Fajun, AU - Wang,Liming, AU - Meng,Zhaodong, Y1 - 2012/02/16/ PY - 2011/09/01/received PY - 2012/01/28/revised PY - 2012/01/30/accepted PY - 2012/2/28/entrez PY - 2012/3/1/pubmed PY - 2012/5/30/medline SP - 212 EP - 22 JF - Gene JO - Gene VL - 498 IS - 2 N2 - The FK506-binding proteins (FKBPs) belong to the peptidyl-prolyl cis/trans isomerase (PPIase) superfamily, and have been implicated in a wide spectrum of biological processes, including protein folding, hormone signaling, plant growth, and stress responses. Genome-wide structural and evolutionary analyses of the entire FKBP gene family have been conducted in Arabidopsis and rice. In the present study, a genome-wide analysis was performed to identify all maize FKBP genes. The availability of complete maize genome sequences allowed for the identification of 24 FKBP genes. Chromosomal locations in the maize genome were determined and the protein domain and motif organization of ZmFKBPs analyzed. The phylogenetic relationships between maize FKBPs were also assessed. The expression profiles of ZmFKBP genes were measured under different environmental conditions and revealed distinct ZmFKBP gene expression patterns under heat, cold, salt, and drought stress. These data not only contribute to a better understanding of the complex regulation of the maize FKBP gene family, but also provide evidence supporting the role of FKBPs in multiple signaling pathways involved in stress responses. This investigation may provide valuable information for further research on stress tolerance in plants and potential strategies for enhancing maize survival under stressful conditions. SN - 1879-0038 UR - https://www.unboundmedicine.com/medline/citation/22366304/Genome_wide_analysis_and_environmental_response_profiling_of_the_FK506_binding_protein_gene_family_in_maize__Zea_mays_L___ L2 - https://linkinghub.elsevier.com/retrieve/pii/S0378-1119(12)00166-7 DB - PRIME DP - Unbound Medicine ER -