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Mitochondrial genome of Onychostoma lini (Teleostei, Cypriniformes).
Mitochondrial DNA. 2012 Jun; 23(3):173-5.MD

Abstract

The complete mitogenome sequence of a vulnerable species Onychostoma lini was determined using polymerase chain reaction and directly sequenced with primer walking method. The complete mitogenome was 16,595 bp in length, containing 37 genes of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a control region (D-loop). The gene order and composition of O. lini was similar to most other fishes. The descending order of the base composition on heavy strand was 31.6% A, 27.9% C, 24.6% T, and 15.9% G, with a relatively lower level of G and a slight AT bias of 56.2%. The codon usage followed the typical vertebrate mitochondrial pattern (ATG or GTG for start codon and TAA or TAG for stop codon). The complete mitogenome sequence of O. lini provides fundamental data for further conversation genetics and captive breeding studies on this species.

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Authors+Show Affiliations

Huang Y
The Key Laboratory of Freshwater Fish Reproduction and Development (Ministry of Education), Key Laboratory of Aquatic Science of Chongqing, School of Life Science, Southwest University, Beibei, Chongqing, PR China.
Zhao G
No affiliation info available
Peng Z
No affiliation info available

MeSH

AnimalsBase CompositionChinaCodonCypriniformesDNA, MitochondrialGene OrderGenes, rRNAGenome, MitochondrialMitochondrial ProteinsPolymerase Chain ReactionRNA, TransferSequence Analysis, DNA

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

22397378

Citation

Huang, Yan, et al. "Mitochondrial Genome of Onychostoma Lini (Teleostei, Cypriniformes)." Mitochondrial DNA, vol. 23, no. 3, 2012, pp. 173-5.
Huang Y, Zhao G, Peng Z. Mitochondrial genome of Onychostoma lini (Teleostei, Cypriniformes). Mitochondrial DNA. 2012;23(3):173-5.
Huang, Y., Zhao, G., & Peng, Z. (2012). Mitochondrial genome of Onychostoma lini (Teleostei, Cypriniformes). Mitochondrial DNA, 23(3), 173-5. https://doi.org/10.3109/19401736.2012.660935
Huang Y, Zhao G, Peng Z. Mitochondrial Genome of Onychostoma Lini (Teleostei, Cypriniformes). Mitochondrial DNA. 2012;23(3):173-5. PubMed PMID: 22397378.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Mitochondrial genome of Onychostoma lini (Teleostei, Cypriniformes). AU - Huang,Yan, AU - Zhao,Guoqing, AU - Peng,Zuogang, Y1 - 2012/03/07/ PY - 2012/3/9/entrez PY - 2012/3/9/pubmed PY - 2012/10/4/medline SP - 173 EP - 5 JF - Mitochondrial DNA JO - Mitochondrial DNA VL - 23 IS - 3 N2 - The complete mitogenome sequence of a vulnerable species Onychostoma lini was determined using polymerase chain reaction and directly sequenced with primer walking method. The complete mitogenome was 16,595 bp in length, containing 37 genes of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a control region (D-loop). The gene order and composition of O. lini was similar to most other fishes. The descending order of the base composition on heavy strand was 31.6% A, 27.9% C, 24.6% T, and 15.9% G, with a relatively lower level of G and a slight AT bias of 56.2%. The codon usage followed the typical vertebrate mitochondrial pattern (ATG or GTG for start codon and TAA or TAG for stop codon). The complete mitogenome sequence of O. lini provides fundamental data for further conversation genetics and captive breeding studies on this species. SN - 1940-1744 UR - https://www.unboundmedicine.com/medline/citation/22397378/Mitochondrial_genome_of_Onychostoma_lini__Teleostei_Cypriniformes__ L2 - https://www.tandfonline.com/doi/full/10.3109/19401736.2012.660935 DB - PRIME DP - Unbound Medicine ER -