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Analysis of three leafminers' complete mitochondrial genomes.
Gene. 2013 Oct 15; 529(1):1-6.GENE

Abstract

Liriomyza trifolii (Burgess), Liriomyza huidobrensis (Blanchard), and Liriomyza bryoniae (Kaltenbach), are three closely related and economically important leafminer pests in the world. This study examined the complete mitochondrial genomes of L. trifolii, L. huidobrensis and L. bryoniae, which were 16,141 bp, 16,236 bp and 16,183 bp in length, respectively. All of them displayed 37 typical animal mitochondrial genes and an A+T-rich region. The genomes were highly compact with only 60-68 bp of non-coding intergenic spacer. However, considerable differences in the A+T-rich region were detected among the three species. Results of this study also showed the two ribosomal RNA genes of the three species had very limited variable sites and thus should not provide much information in the study of population genetics of these species. Data generated from three leafminers' complete mitochondrial genomes should provide valuable information in studying phylogeny of Diptera, and developing genetic markers for species identification in leafminers.

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Authors+Show Affiliations

Yang F
College of Horticulture and Plant Protection and Institute of Applied Entomology, Yangzhou University, Yangzhou 225009, PR China; Department of Entomology, Louisiana State University Agricultural Center, Baton Rouge, LA 70803, USA.
Du Y
No affiliation info available
Cao J
No affiliation info available
Huang F
No affiliation info available

MeSH

AnimalsDNA PrimersDNA, IntergenicDNA, MitochondrialDipteraGene OrderGenes, MitochondrialGenes, rRNAGenetic MarkersGenome, InsectGenome, MitochondrialMolecular Sequence DataNucleic Acid ConformationPhylogenyRNA, RibosomalSequence Analysis, DNA

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

23954222

Citation

Yang, Fei, et al. "Analysis of Three Leafminers' Complete Mitochondrial Genomes." Gene, vol. 529, no. 1, 2013, pp. 1-6.
Yang F, Du Y, Cao J, et al. Analysis of three leafminers' complete mitochondrial genomes. Gene. 2013;529(1):1-6.
Yang, F., Du, Y., Cao, J., & Huang, F. (2013). Analysis of three leafminers' complete mitochondrial genomes. Gene, 529(1), 1-6. https://doi.org/10.1016/j.gene.2013.08.010
Yang F, et al. Analysis of Three Leafminers' Complete Mitochondrial Genomes. Gene. 2013 Oct 15;529(1):1-6. PubMed PMID: 23954222.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Analysis of three leafminers' complete mitochondrial genomes. AU - Yang,Fei, AU - Du,Yuzhou, AU - Cao,Jingman, AU - Huang,Fangneng, Y1 - 2013/08/13/ PY - 2013/06/17/received PY - 2013/08/01/revised PY - 2013/08/04/accepted PY - 2013/8/20/entrez PY - 2013/8/21/pubmed PY - 2013/10/30/medline KW - ATP synthase F0 subunit 6 KW - ATP synthase F0 subunit 8 KW - Diptera KW - Genome KW - Ile KW - Introduced Species KW - Isoleucine KW - Leu KW - Leucine KW - Mitochondrial KW - NADH dehydrogenase subunit 1 KW - NADH dehydrogenase subunit 2 KW - NADH dehydrogenase subunit 3 KW - NADH dehydrogenase subunit 4 KW - NADH dehydrogenase subunit 4l KW - NADH dehydrogenase subunit 5 KW - NADH dehydrogenase subunit 6 KW - Phe KW - Phenylalanine KW - Ser KW - Serine KW - atp6 KW - atp8 KW - cob KW - cox1 KW - cox2 KW - cox3 KW - cytochrome b KW - cytochrome c oxidase subunit 1 KW - cytochrome c oxidase subunit 2 KW - cytochrome c oxidase subunit 3 KW - mitochondrial 12s ribosomal rna KW - mitochondrial 16s ribosomal rna KW - nad1 KW - nad2 KW - nad3 KW - nad4 KW - nad4l KW - nad5 KW - nad6 KW - rrnL KW - rrnS SP - 1 EP - 6 JF - Gene JO - Gene VL - 529 IS - 1 N2 - Liriomyza trifolii (Burgess), Liriomyza huidobrensis (Blanchard), and Liriomyza bryoniae (Kaltenbach), are three closely related and economically important leafminer pests in the world. This study examined the complete mitochondrial genomes of L. trifolii, L. huidobrensis and L. bryoniae, which were 16,141 bp, 16,236 bp and 16,183 bp in length, respectively. All of them displayed 37 typical animal mitochondrial genes and an A+T-rich region. The genomes were highly compact with only 60-68 bp of non-coding intergenic spacer. However, considerable differences in the A+T-rich region were detected among the three species. Results of this study also showed the two ribosomal RNA genes of the three species had very limited variable sites and thus should not provide much information in the study of population genetics of these species. Data generated from three leafminers' complete mitochondrial genomes should provide valuable information in studying phylogeny of Diptera, and developing genetic markers for species identification in leafminers. SN - 1879-0038 UR - https://www.unboundmedicine.com/medline/citation/23954222/Analysis_of_three_leafminers'_complete_mitochondrial_genomes_ L2 - https://linkinghub.elsevier.com/retrieve/pii/S0378-1119(13)01026-3 DB - PRIME DP - Unbound Medicine ER -