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Regional environmental pressure influences population differentiation in turbot (Scophthalmus maximus).
Mol Ecol. 2014 Feb; 23(3):618-36.ME

Abstract

Unravelling the factors shaping the genetic structure of mobile marine species is challenging due to the high potential for gene flow. However, genetic inference can be greatly enhanced by increasing the genomic, geographical or environmental resolution of population genetic studies. Here, we investigated the population structure of turbot (Scophthalmus maximus) by screening 17 random and gene-linked markers in 999 individuals at 290 geographical locations throughout the northeast Atlantic Ocean. A seascape genetics approach with the inclusion of high-resolution oceanographical data was used to quantify the association of genetic variation with spatial, temporal and environmental parameters. Neutral loci identified three subgroups: an Atlantic group, a Baltic Sea group and one on the Irish Shelf. The inclusion of loci putatively under selection suggested an additional break in the North Sea, subdividing southern from northern Atlantic individuals. Environmental and spatial seascape variables correlated marginally with neutral genetic variation, but explained significant proportions (respectively, 8.7% and 10.3%) of adaptive genetic variation. Environmental variables associated with outlier allele frequencies included salinity, temperature, bottom shear stress, dissolved oxygen concentration and depth of the pycnocline. Furthermore, levels of explained adaptive genetic variation differed markedly between basins (3% vs. 12% in the North and Baltic Sea, respectively). We suggest that stable environmental selection pressure contributes to relatively strong local adaptation in the Baltic Sea. Our seascape genetic approach using a large number of sampling locations and associated oceanographical data proved useful for the identification of population units as the basis of management decisions.

Authors+Show Affiliations

Institute for Agricultural and Fisheries Research (ILVO), Animal Sciences Unit - Fisheries, Ankerstraat 1, B-8400, Ostend, Belgium; Laboratory of Biodiversity and Evolutionary Genomics, University of Leuven, Charles Deberiotstraat 32, B-3000, Leuven, Belgium.No affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info available

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

24354713

Citation

Vandamme, S G., et al. "Regional Environmental Pressure Influences Population Differentiation in Turbot (Scophthalmus Maximus)." Molecular Ecology, vol. 23, no. 3, 2014, pp. 618-36.
Vandamme SG, Maes GE, Raeymaekers JA, et al. Regional environmental pressure influences population differentiation in turbot (Scophthalmus maximus). Mol Ecol. 2014;23(3):618-36.
Vandamme, S. G., Maes, G. E., Raeymaekers, J. A., Cottenie, K., Imsland, A. K., Hellemans, B., Lacroix, G., Mac Aoidh, E., Martinsohn, J. T., Martínez, P., Robbens, J., Vilas, R., & Volckaert, F. A. (2014). Regional environmental pressure influences population differentiation in turbot (Scophthalmus maximus). Molecular Ecology, 23(3), 618-36. https://doi.org/10.1111/mec.12628
Vandamme SG, et al. Regional Environmental Pressure Influences Population Differentiation in Turbot (Scophthalmus Maximus). Mol Ecol. 2014;23(3):618-36. PubMed PMID: 24354713.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Regional environmental pressure influences population differentiation in turbot (Scophthalmus maximus). AU - Vandamme,S G, AU - Maes,G E, AU - Raeymaekers,J A M, AU - Cottenie,K, AU - Imsland,A K, AU - Hellemans,B, AU - Lacroix,G, AU - Mac Aoidh,E, AU - Martinsohn,J T, AU - Martínez,P, AU - Robbens,J, AU - Vilas,R, AU - Volckaert,F A M, PY - 2013/02/18/received PY - 2013/12/02/revised PY - 2013/12/08/accepted PY - 2013/12/21/entrez PY - 2013/12/21/pubmed PY - 2014/5/23/medline KW - Scophthalmus maximus KW - adaptive genetic variation KW - microsatellite KW - oceanography KW - population structure KW - seascape genetics SP - 618 EP - 36 JF - Molecular ecology JO - Mol Ecol VL - 23 IS - 3 N2 - Unravelling the factors shaping the genetic structure of mobile marine species is challenging due to the high potential for gene flow. However, genetic inference can be greatly enhanced by increasing the genomic, geographical or environmental resolution of population genetic studies. Here, we investigated the population structure of turbot (Scophthalmus maximus) by screening 17 random and gene-linked markers in 999 individuals at 290 geographical locations throughout the northeast Atlantic Ocean. A seascape genetics approach with the inclusion of high-resolution oceanographical data was used to quantify the association of genetic variation with spatial, temporal and environmental parameters. Neutral loci identified three subgroups: an Atlantic group, a Baltic Sea group and one on the Irish Shelf. The inclusion of loci putatively under selection suggested an additional break in the North Sea, subdividing southern from northern Atlantic individuals. Environmental and spatial seascape variables correlated marginally with neutral genetic variation, but explained significant proportions (respectively, 8.7% and 10.3%) of adaptive genetic variation. Environmental variables associated with outlier allele frequencies included salinity, temperature, bottom shear stress, dissolved oxygen concentration and depth of the pycnocline. Furthermore, levels of explained adaptive genetic variation differed markedly between basins (3% vs. 12% in the North and Baltic Sea, respectively). We suggest that stable environmental selection pressure contributes to relatively strong local adaptation in the Baltic Sea. Our seascape genetic approach using a large number of sampling locations and associated oceanographical data proved useful for the identification of population units as the basis of management decisions. SN - 1365-294X UR - https://www.unboundmedicine.com/medline/citation/24354713/Regional_environmental_pressure_influences_population_differentiation_in_turbot__Scophthalmus_maximus__ DB - PRIME DP - Unbound Medicine ER -