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The complete mitogenome of the freshwater fairy shrimp Streptocephalus sirindhornae (Crustacea: Anostraca: Streptocephalidae).

Abstract

In this study, we amplified, sequenced and analyzed the complete mitogenome of the freshwater fairy shrimp Streptocephalus sirindhornae (Crustacea: Anostraca: Streptocephalidae). The full-length of the S. sirindhornae mitogenome is a circular molecule of 16,887 bp in size with an A + T content of 64.5%. It has the largest putative control region (2794 bp) with the lowest A + T content (62.6%) for all determined branchiopod mitogenomes. The genome consisted of 37 genes that are involved in the respiration chain as well as the mitochondrial translation system. The S. sirindhornae mitogenome exhibits an identical gene arrangement as the Artemia pattern, which shows translocation and inversion of two transfer-RNA genes compared to the pancrustacean ancestral pattern. This is by far the first determined mitogenome of a freshwater fairy shrimp. The results of our study will provide significant data for reconstructing the consensus Branchiopoda tree of life.

Authors+Show Affiliations

a Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education and College of Life Sciences , Zhejiang University , Hangzhou , Zhejiang , PR China .b School of Basic Medical Sciences, Zhejiang Chinese Medical University , Hangzhou , Zhejiang , PR China , and.c Department of Pharmacology , Faculty of Veterinary Medicine, Kasetsart University , Bangkok , Thailand.a Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education and College of Life Sciences , Zhejiang University , Hangzhou , Zhejiang , PR China .

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

25693703

Citation

Liu, Xue-Chen, et al. "The Complete Mitogenome of the Freshwater Fairy Shrimp Streptocephalus Sirindhornae (Crustacea: Anostraca: Streptocephalidae)." Mitochondrial DNA. Part A, DNA Mapping, Sequencing, and Analysis, vol. 27, no. 5, 2016, pp. 3189-91.
Liu XC, Li HW, Jermnak U, et al. The complete mitogenome of the freshwater fairy shrimp Streptocephalus sirindhornae (Crustacea: Anostraca: Streptocephalidae). Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(5):3189-91.
Liu, X. C., Li, H. W., Jermnak, U., & Yang, J. S. (2016). The complete mitogenome of the freshwater fairy shrimp Streptocephalus sirindhornae (Crustacea: Anostraca: Streptocephalidae). Mitochondrial DNA. Part A, DNA Mapping, Sequencing, and Analysis, 27(5), pp. 3189-91. doi:10.3109/19401736.2015.1007329.
Liu XC, et al. The Complete Mitogenome of the Freshwater Fairy Shrimp Streptocephalus Sirindhornae (Crustacea: Anostraca: Streptocephalidae). Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(5):3189-91. PubMed PMID: 25693703.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - The complete mitogenome of the freshwater fairy shrimp Streptocephalus sirindhornae (Crustacea: Anostraca: Streptocephalidae). AU - Liu,Xue-Chen, AU - Li,Hua-Wei, AU - Jermnak,Usuma, AU - Yang,Jin-Shu, Y1 - 2015/02/19/ PY - 2015/2/20/entrez PY - 2015/2/20/pubmed PY - 2018/2/2/medline KW - Anostraca KW - Streptocephalidae KW - Streptocephalus sirindhornae KW - mitochondrial genome SP - 3189 EP - 91 JF - Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis JO - Mitochondrial DNA A DNA Mapp Seq Anal VL - 27 IS - 5 N2 - In this study, we amplified, sequenced and analyzed the complete mitogenome of the freshwater fairy shrimp Streptocephalus sirindhornae (Crustacea: Anostraca: Streptocephalidae). The full-length of the S. sirindhornae mitogenome is a circular molecule of 16,887 bp in size with an A + T content of 64.5%. It has the largest putative control region (2794 bp) with the lowest A + T content (62.6%) for all determined branchiopod mitogenomes. The genome consisted of 37 genes that are involved in the respiration chain as well as the mitochondrial translation system. The S. sirindhornae mitogenome exhibits an identical gene arrangement as the Artemia pattern, which shows translocation and inversion of two transfer-RNA genes compared to the pancrustacean ancestral pattern. This is by far the first determined mitogenome of a freshwater fairy shrimp. The results of our study will provide significant data for reconstructing the consensus Branchiopoda tree of life. SN - 2470-1408 UR - https://www.unboundmedicine.com/medline/citation/25693703/The_complete_mitogenome_of_the_freshwater_fairy_shrimp_Streptocephalus_sirindhornae__Crustacea:_Anostraca:_Streptocephalidae__ DB - PRIME DP - Unbound Medicine ER -