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Gold-nanoparticle extraction and reversed-electrode-polarity stacking mode combined to enhance capillary electrophoresis sensitivity for conjugated nucleosides and oligonucleotides containing thioether linkers.
Anal Bioanal Chem. 2015 Jul; 407(18):5405-15.AB

Abstract

We present a capillary electrophoresis method for determining two different C8-conjugated deoxyadenosines, and for oligonucleotides containing them, in which a psoralen or an acridine molecule is bonded to the base via a short alkyl chain containing sulfur ethers at both ends. The sensitivity of the micellar electrokinetic chromatography (MEKC) method was increased by using two preconcentration techniques, micro solid-phase extraction (μSPE) followed by reversed-electrode-polarity stacking mode (REPSM). Variables that affect the efficiency of the extraction in μSPE and preconcentration by REPSM, including the type and volume of extraction nanoparticle, concentration, and injection time, were investigated. Under the optimum conditions, enrichment factors obtained were in the range 360-400. The limits of detection (LODs) at a signal-to-noise ratio of 3 ranged from 2 to 5 nmol L(-1). The relative recoveries of labelled adenosines from water samples were 95-103%. The proposed method provided high enrichment factors and good precision and accuracy with a short analysis time. On the basis of the advantages of simplicity, high selectivity, high sensitivity, and good reproducibility, the proposed method may have great potential for biochemical applications.

Authors+Show Affiliations

Department of Chemistry and Pharmaceutical Sciences, University of Ferrara, via L. Borsari 46, 44121, Ferrara, Italy.No affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info availableNo affiliation info available

Pub Type(s)

Evaluation Study
Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

25956598

Citation

Bosi, Valentina, et al. "Gold-nanoparticle Extraction and Reversed-electrode-polarity Stacking Mode Combined to Enhance Capillary Electrophoresis Sensitivity for Conjugated Nucleosides and Oligonucleotides Containing Thioether Linkers." Analytical and Bioanalytical Chemistry, vol. 407, no. 18, 2015, pp. 5405-15.
Bosi V, Sarti E, Navacchia ML, et al. Gold-nanoparticle extraction and reversed-electrode-polarity stacking mode combined to enhance capillary electrophoresis sensitivity for conjugated nucleosides and oligonucleotides containing thioether linkers. Anal Bioanal Chem. 2015;407(18):5405-15.
Bosi, V., Sarti, E., Navacchia, M. L., Perrone, D., Pasti, L., Cavazzini, A., & Capobianco, M. L. (2015). Gold-nanoparticle extraction and reversed-electrode-polarity stacking mode combined to enhance capillary electrophoresis sensitivity for conjugated nucleosides and oligonucleotides containing thioether linkers. Analytical and Bioanalytical Chemistry, 407(18), 5405-15. https://doi.org/10.1007/s00216-015-8702-6
Bosi V, et al. Gold-nanoparticle Extraction and Reversed-electrode-polarity Stacking Mode Combined to Enhance Capillary Electrophoresis Sensitivity for Conjugated Nucleosides and Oligonucleotides Containing Thioether Linkers. Anal Bioanal Chem. 2015;407(18):5405-15. PubMed PMID: 25956598.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Gold-nanoparticle extraction and reversed-electrode-polarity stacking mode combined to enhance capillary electrophoresis sensitivity for conjugated nucleosides and oligonucleotides containing thioether linkers. AU - Bosi,Valentina, AU - Sarti,Elena, AU - Navacchia,Maria Luisa, AU - Perrone,Daniela, AU - Pasti,Luisa, AU - Cavazzini,Alberto, AU - Capobianco,Massimo L, Y1 - 2015/05/10/ PY - 2015/02/10/received PY - 2015/04/13/accepted PY - 2015/04/02/revised PY - 2015/5/10/entrez PY - 2015/5/10/pubmed PY - 2016/3/19/medline SP - 5405 EP - 15 JF - Analytical and bioanalytical chemistry JO - Anal Bioanal Chem VL - 407 IS - 18 N2 - We present a capillary electrophoresis method for determining two different C8-conjugated deoxyadenosines, and for oligonucleotides containing them, in which a psoralen or an acridine molecule is bonded to the base via a short alkyl chain containing sulfur ethers at both ends. The sensitivity of the micellar electrokinetic chromatography (MEKC) method was increased by using two preconcentration techniques, micro solid-phase extraction (μSPE) followed by reversed-electrode-polarity stacking mode (REPSM). Variables that affect the efficiency of the extraction in μSPE and preconcentration by REPSM, including the type and volume of extraction nanoparticle, concentration, and injection time, were investigated. Under the optimum conditions, enrichment factors obtained were in the range 360-400. The limits of detection (LODs) at a signal-to-noise ratio of 3 ranged from 2 to 5 nmol L(-1). The relative recoveries of labelled adenosines from water samples were 95-103%. The proposed method provided high enrichment factors and good precision and accuracy with a short analysis time. On the basis of the advantages of simplicity, high selectivity, high sensitivity, and good reproducibility, the proposed method may have great potential for biochemical applications. SN - 1618-2650 UR - https://www.unboundmedicine.com/medline/citation/25956598/Gold_nanoparticle_extraction_and_reversed_electrode_polarity_stacking_mode_combined_to_enhance_capillary_electrophoresis_sensitivity_for_conjugated_nucleosides_and_oligonucleotides_containing_thioether_linkers_ DB - PRIME DP - Unbound Medicine ER -