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Phylogenetics of moth-like butterflies (Papilionoidea: Hedylidae) based on a new 13-locus target capture probe set.
Mol Phylogenet Evol. 2018 10; 127:600-605.MP

Abstract

The Neotropical moth-like butterflies (Hedylidae) are perhaps the most unusual butterfly family. In addition to being species-poor, this family is predominantly nocturnal and has anti-bat ultrasound hearing organs. Evolutionary relationships among the 36 described species are largely unexplored. A new, target capture, anchored hybrid enrichment probe set ('BUTTERFLY2.0') was developed to infer relationships of hedylids and some of their butterfly relatives. The probe set includes 13 genes that have historically been used in butterfly phylogenetics. Our dataset comprised of up to 10,898 aligned base pairs from 22 hedylid species and 19 outgroups. Eleven of the thirteen loci were successfully captured from all samples, and the remaining loci were captured from ≥94% of samples. The inferred phylogeny was consistent with recent molecular studies by placing Hedylidae sister to Hesperiidae, and the tree had robust support for 80% of nodes. Our results are also consistent with morphological studies, with Macrosoma tipulata as the sister species to all remaining hedylids, followed by M. semiermis sister to the remaining species in the genus. We tested the hypothesis that nocturnality evolved once from diurnality in Hedylidae, and demonstrate that the ancestral condition was likely diurnal, with a shift to nocturnality early in the diversification of this family. The BUTTERFLY2.0 probe set includes standard butterfly phylogenetics markers, captures sequences from decades-old museum specimens, and is a cost-effective technique to infer phylogenetic relationships of the butterfly tree of life.

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Publisher Full Text (DOI)

Authors+Show Affiliations

Kawahara AY
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA; Entomology and Nematology Department, University of Florida, Gainesville, FL 32611, USA; Department of Biology, University of Florida, Gainesville, FL 32611, USA. Electronic address: kawahara@flmnh.ufl.edu.
Breinholt JW
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA; RAPiD Genomics, 747 SW 2nd Avenue, IMB#14, Gainesville, FL 32601, USA.
Espeland M
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA; Arthropoda Department, Zoological Research Museum Alexander Koenig, Adenauer Allee 160, Bonn 53113, Germany.
Storer C
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.
Plotkin D
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA; Entomology and Nematology Department, University of Florida, Gainesville, FL 32611, USA.
Dexter KM
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.
Toussaint EFA
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.
St Laurent RA
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA; Department of Biology, University of Florida, Gainesville, FL 32611, USA.
Brehm G
Institute of Zoology and Evolutionary Biology with Phyletic Museum, Friedrich-Schiller-University Jena, Jena 07743, Germany.
Vargas S
Laboratorio de Entomología, Departamento de Biología, Pontificia Universidad Javeriana, Bogotá, Colombia.
Forero D
Laboratorio de Entomología, Departamento de Biología, Pontificia Universidad Javeriana, Bogotá, Colombia.
Pierce NE
Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138, USA.
Lohman DJ
Biology Department, City College of New York, New York, NY 10031, USA; Ph.D. Program in Biology, Graduate Center, City University of New York, New York, NY 10016, USA; Entomology Section, National Museum of the Philippines, Manila 1000, Philippines.

MeSH

AnimalsBase SequenceButterfliesDNA ProbesGenetic LociLikelihood FunctionsMothsPhylogeny

Pub Type(s)

Journal Article
Research Support, U.S. Gov't, Non-P.H.S.

Language

eng

PubMed ID

29902572

Citation

Kawahara, Akito Y., et al. "Phylogenetics of Moth-like Butterflies (Papilionoidea: Hedylidae) Based On a New 13-locus Target Capture Probe Set." Molecular Phylogenetics and Evolution, vol. 127, 2018, pp. 600-605.
Kawahara AY, Breinholt JW, Espeland M, et al. Phylogenetics of moth-like butterflies (Papilionoidea: Hedylidae) based on a new 13-locus target capture probe set. Mol Phylogenet Evol. 2018;127:600-605.
Kawahara, A. Y., Breinholt, J. W., Espeland, M., Storer, C., Plotkin, D., Dexter, K. M., Toussaint, E. F. A., St Laurent, R. A., Brehm, G., Vargas, S., Forero, D., Pierce, N. E., & Lohman, D. J. (2018). Phylogenetics of moth-like butterflies (Papilionoidea: Hedylidae) based on a new 13-locus target capture probe set. Molecular Phylogenetics and Evolution, 127, 600-605. https://doi.org/10.1016/j.ympev.2018.06.002
Kawahara AY, et al. Phylogenetics of Moth-like Butterflies (Papilionoidea: Hedylidae) Based On a New 13-locus Target Capture Probe Set. Mol Phylogenet Evol. 2018;127:600-605. PubMed PMID: 29902572.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Phylogenetics of moth-like butterflies (Papilionoidea: Hedylidae) based on a new 13-locus target capture probe set. AU - Kawahara,Akito Y, AU - Breinholt,Jesse W, AU - Espeland,Marianne, AU - Storer,Caroline, AU - Plotkin,David, AU - Dexter,Kelly M, AU - Toussaint,Emmanuel F A, AU - St Laurent,Ryan A, AU - Brehm,Gunnar, AU - Vargas,Sergio, AU - Forero,Dimitri, AU - Pierce,Naomi E, AU - Lohman,David J, Y1 - 2018/06/11/ PY - 2018/03/27/received PY - 2018/05/25/revised PY - 2018/06/02/accepted PY - 2018/6/15/pubmed PY - 2019/2/9/medline PY - 2018/6/15/entrez KW - Anchored hybrid enrichment KW - Exon capture KW - Lepidoptera systematics KW - Papilionoidea KW - Phylogenomics SP - 600 EP - 605 JF - Molecular phylogenetics and evolution JO - Mol Phylogenet Evol VL - 127 N2 - The Neotropical moth-like butterflies (Hedylidae) are perhaps the most unusual butterfly family. In addition to being species-poor, this family is predominantly nocturnal and has anti-bat ultrasound hearing organs. Evolutionary relationships among the 36 described species are largely unexplored. A new, target capture, anchored hybrid enrichment probe set ('BUTTERFLY2.0') was developed to infer relationships of hedylids and some of their butterfly relatives. The probe set includes 13 genes that have historically been used in butterfly phylogenetics. Our dataset comprised of up to 10,898 aligned base pairs from 22 hedylid species and 19 outgroups. Eleven of the thirteen loci were successfully captured from all samples, and the remaining loci were captured from ≥94% of samples. The inferred phylogeny was consistent with recent molecular studies by placing Hedylidae sister to Hesperiidae, and the tree had robust support for 80% of nodes. Our results are also consistent with morphological studies, with Macrosoma tipulata as the sister species to all remaining hedylids, followed by M. semiermis sister to the remaining species in the genus. We tested the hypothesis that nocturnality evolved once from diurnality in Hedylidae, and demonstrate that the ancestral condition was likely diurnal, with a shift to nocturnality early in the diversification of this family. The BUTTERFLY2.0 probe set includes standard butterfly phylogenetics markers, captures sequences from decades-old museum specimens, and is a cost-effective technique to infer phylogenetic relationships of the butterfly tree of life. SN - 1095-9513 UR - https://www.unboundmedicine.com/medline/citation/29902572/Phylogenetics_of_moth_like_butterflies__Papilionoidea:_Hedylidae__based_on_a_new_13_locus_target_capture_probe_set_ DB - PRIME DP - Unbound Medicine ER -