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Cover cropping can be a stronger determinant than host crop identity for arbuscular mycorrhizal fungal communities colonizing maize and soybean.
PeerJ. 2019; 7:e6403.P

Abstract

BACKGROUND

Understanding the role of communities of arbuscular mycorrhizal fungi (AMF) in agricultural systems is imperative for enhancing crop production. The key variables influencing change in AMF communities are the type of cover crop species or the type of subsequent host crop species. However, how maize and soybean performance is related to the diversity of AMF communities in cover cropping systems remains unclear. We therefore investigated which cover cropping or host identity is the most important factor in shaping AMF community structure in subsequent crop roots using an Illumina Miseq platform amplicon sequencing.

METHODS

In this study, we established three cover crop systems (Italian ryegrass, hairy vetch, and brown mustard) or bare fallow prior to planting maize and soybean as cash crops. After cover cropping, we divided the cover crop experimental plots into two subsequent crop plots (maize and soybean) to understand which cover cropping or host crop identity is an important factor for determining the AMF communities and diversity both in maize and soybeans.

RESULTS

We found that most of the operational taxonomic units (OTUs) in root samples were common in both maize and soybean, and the proportion of common generalists in this experiment for maize and soybean roots was 79.5% according to the multinomial species classification method (CLAM test). The proportion of OTUs specifically detected in only maize and soybean was 9.6% and 10.8%, respectively. Additionally, the cover cropping noticeably altered the AMF community structure in the maize and soybean roots. However, the differentiation of AMF communities between maize and soybean was not significantly different.

DISCUSSION

Our results suggest cover cropping prior to planting maize and soybean may be a strong factor for shaping AMF community structure in subsequent maize and soybean roots rather than two host crop identities. Additionally, we could not determine the suitable rotational combination for cover crops and subsequent maize and soybean crops to improve the diversity of the AMF communities in their roots. However, our findings may have implications for understanding suitable rotational combinations between cover crops and subsequent cash crops and further research should investigate in-depth the benefit of AMF on cash crop performances in cover crop rotational systems.

Authors+Show Affiliations

Department of Agricultural Bioscience, College of Bioresource Sciences, Nihon University, Fujisawa, Kanagawa, Japan.Department of Agricultural Bioscience, College of Bioresource Sciences, Nihon University, Fujisawa, Kanagawa, Japan.Department of Agricultural Bioscience, College of Bioresource Sciences, Nihon University, Fujisawa, Kanagawa, Japan.Department of Agricultural Bioscience, College of Bioresource Sciences, Nihon University, Fujisawa, Kanagawa, Japan.Department of Agricultural Bioscience, College of Bioresource Sciences, Nihon University, Fujisawa, Kanagawa, Japan.

Pub Type(s)

Journal Article

Language

eng

PubMed ID

30775179

Citation

Higo, Masao, et al. "Cover Cropping Can Be a Stronger Determinant Than Host Crop Identity for Arbuscular Mycorrhizal Fungal Communities Colonizing Maize and Soybean." PeerJ, vol. 7, 2019, pp. e6403.
Higo M, Tatewaki Y, Gunji K, et al. Cover cropping can be a stronger determinant than host crop identity for arbuscular mycorrhizal fungal communities colonizing maize and soybean. PeerJ. 2019;7:e6403.
Higo, M., Tatewaki, Y., Gunji, K., Kaseda, A., & Isobe, K. (2019). Cover cropping can be a stronger determinant than host crop identity for arbuscular mycorrhizal fungal communities colonizing maize and soybean. PeerJ, 7, e6403. https://doi.org/10.7717/peerj.6403
Higo M, et al. Cover Cropping Can Be a Stronger Determinant Than Host Crop Identity for Arbuscular Mycorrhizal Fungal Communities Colonizing Maize and Soybean. PeerJ. 2019;7:e6403. PubMed PMID: 30775179.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Cover cropping can be a stronger determinant than host crop identity for arbuscular mycorrhizal fungal communities colonizing maize and soybean. AU - Higo,Masao, AU - Tatewaki,Yuya, AU - Gunji,Kento, AU - Kaseda,Akari, AU - Isobe,Katsunori, Y1 - 2019/02/08/ PY - 2018/08/24/received PY - 2019/01/07/accepted PY - 2019/2/19/entrez PY - 2019/2/19/pubmed PY - 2019/2/19/medline KW - Amplicon sequencing KW - Arbuscular mycorrhizal fungi KW - Cover cropping KW - Glycine max (L.) Merr. KW - Host identity KW - Illumina Miseq platform KW - Zea mays L. SP - e6403 EP - e6403 JF - PeerJ JO - PeerJ VL - 7 N2 - BACKGROUND: Understanding the role of communities of arbuscular mycorrhizal fungi (AMF) in agricultural systems is imperative for enhancing crop production. The key variables influencing change in AMF communities are the type of cover crop species or the type of subsequent host crop species. However, how maize and soybean performance is related to the diversity of AMF communities in cover cropping systems remains unclear. We therefore investigated which cover cropping or host identity is the most important factor in shaping AMF community structure in subsequent crop roots using an Illumina Miseq platform amplicon sequencing. METHODS: In this study, we established three cover crop systems (Italian ryegrass, hairy vetch, and brown mustard) or bare fallow prior to planting maize and soybean as cash crops. After cover cropping, we divided the cover crop experimental plots into two subsequent crop plots (maize and soybean) to understand which cover cropping or host crop identity is an important factor for determining the AMF communities and diversity both in maize and soybeans. RESULTS: We found that most of the operational taxonomic units (OTUs) in root samples were common in both maize and soybean, and the proportion of common generalists in this experiment for maize and soybean roots was 79.5% according to the multinomial species classification method (CLAM test). The proportion of OTUs specifically detected in only maize and soybean was 9.6% and 10.8%, respectively. Additionally, the cover cropping noticeably altered the AMF community structure in the maize and soybean roots. However, the differentiation of AMF communities between maize and soybean was not significantly different. DISCUSSION: Our results suggest cover cropping prior to planting maize and soybean may be a strong factor for shaping AMF community structure in subsequent maize and soybean roots rather than two host crop identities. Additionally, we could not determine the suitable rotational combination for cover crops and subsequent maize and soybean crops to improve the diversity of the AMF communities in their roots. However, our findings may have implications for understanding suitable rotational combinations between cover crops and subsequent cash crops and further research should investigate in-depth the benefit of AMF on cash crop performances in cover crop rotational systems. SN - 2167-8359 UR - https://www.unboundmedicine.com/medline/citation/30775179/Cover_cropping_can_be_a_stronger_determinant_than_host_crop_identity_for_arbuscular_mycorrhizal_fungal_communities_colonizing_maize_and_soybean_ DB - PRIME DP - Unbound Medicine ER -