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Intron-assisted, viroid-based production of insecticidal circular double-stranded RNA in Escherichia coli.
RNA Biol. 2021 11; 18(11):1846-1857.RB

Abstract

RNA interference (RNAi) is a natural mechanism for protecting against harmful genetic elements and regulating gene expression, which can be artificially triggered by the delivery of homologous double-stranded RNA (dsRNA). This mechanism can be exploited as a highly specific and environmentally friendly pest control strategy. To this aim, systems for producing large amounts of recombinant dsRNA are necessary. We describe a system to efficiently produce large amounts of circular dsRNA in Escherichia coli and demonstrate the efficient insecticidal activity of these molecules against Western corn rootworm (WCR, Diabrotica virgifera virgifera LeConte), a highly damaging pest of corn crops. In our system, the two strands of the dsRNA are expressed in E. coli embedded within the very stable scaffold of Eggplant latent viroid (ELVd), a small circular non-coding RNA. Stability in E. coli of the corresponding plasmids with long inverted repeats was achieved by using a cDNA coding for a group-I autocatalytic intron from Tetrahymena thermophila as a spacer. RNA circularization and large-scale accumulation in E. coli cells was facilitated by co-expression of eggplant tRNA ligase, the enzyme that ligates ELVd during replication in the host plant. The inserted intron efficiently self-spliced from the RNA product during transcription. Circular RNAs containing a dsRNA moiety homologous to smooth septate junction 1 (DvSSJ1) gene exhibited excellent insecticide activity against WCR larvae. Finally, we show that the viroid scaffold can be separated from the final circular dsRNA product using a second T. thermophila self-splicing intron in a permuted form.

Authors+Show Affiliations

Instituto de Biología Molecular y Celular de Plantas (Consejo Superior de Investigaciones Científicas-Universitat Politècnica de Valencia), Valencia, Spain.Instituto de Biología Molecular y Celular de Plantas (Consejo Superior de Investigaciones Científicas-Universitat Politècnica de Valencia), Valencia, Spain.Corteva Agriscience, Johnston, Iowa, USA.Instituto de Biología Molecular y Celular de Plantas (Consejo Superior de Investigaciones Científicas-Universitat Politècnica de Valencia), Valencia, Spain.

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

33472518

Citation

Ortolá, Beltrán, et al. "Intron-assisted, Viroid-based Production of Insecticidal Circular Double-stranded RNA in Escherichia Coli." RNA Biology, vol. 18, no. 11, 2021, pp. 1846-1857.
Ortolá B, Cordero T, Hu X, et al. Intron-assisted, viroid-based production of insecticidal circular double-stranded RNA in Escherichia coli. RNA Biol. 2021;18(11):1846-1857.
Ortolá, B., Cordero, T., Hu, X., & Daròs, J. A. (2021). Intron-assisted, viroid-based production of insecticidal circular double-stranded RNA in Escherichia coli. RNA Biology, 18(11), 1846-1857. https://doi.org/10.1080/15476286.2021.1872962
Ortolá B, et al. Intron-assisted, Viroid-based Production of Insecticidal Circular Double-stranded RNA in Escherichia Coli. RNA Biol. 2021;18(11):1846-1857. PubMed PMID: 33472518.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Intron-assisted, viroid-based production of insecticidal circular double-stranded RNA in Escherichia coli. AU - Ortolá,Beltrán, AU - Cordero,Teresa, AU - Hu,Xu, AU - Daròs,José-Antonio, Y1 - 2021/01/20/ PY - 2021/1/22/pubmed PY - 2022/2/25/medline PY - 2021/1/21/entrez KW - Diabrotica virgifera KW - Escherichia coli KW - RNA interference KW - double-stranded RNA KW - eggplant latent viroid KW - group-I self-splicing intron KW - intron-exon permutation SP - 1846 EP - 1857 JF - RNA biology JO - RNA Biol VL - 18 IS - 11 N2 - RNA interference (RNAi) is a natural mechanism for protecting against harmful genetic elements and regulating gene expression, which can be artificially triggered by the delivery of homologous double-stranded RNA (dsRNA). This mechanism can be exploited as a highly specific and environmentally friendly pest control strategy. To this aim, systems for producing large amounts of recombinant dsRNA are necessary. We describe a system to efficiently produce large amounts of circular dsRNA in Escherichia coli and demonstrate the efficient insecticidal activity of these molecules against Western corn rootworm (WCR, Diabrotica virgifera virgifera LeConte), a highly damaging pest of corn crops. In our system, the two strands of the dsRNA are expressed in E. coli embedded within the very stable scaffold of Eggplant latent viroid (ELVd), a small circular non-coding RNA. Stability in E. coli of the corresponding plasmids with long inverted repeats was achieved by using a cDNA coding for a group-I autocatalytic intron from Tetrahymena thermophila as a spacer. RNA circularization and large-scale accumulation in E. coli cells was facilitated by co-expression of eggplant tRNA ligase, the enzyme that ligates ELVd during replication in the host plant. The inserted intron efficiently self-spliced from the RNA product during transcription. Circular RNAs containing a dsRNA moiety homologous to smooth septate junction 1 (DvSSJ1) gene exhibited excellent insecticide activity against WCR larvae. Finally, we show that the viroid scaffold can be separated from the final circular dsRNA product using a second T. thermophila self-splicing intron in a permuted form. SN - 1555-8584 UR - https://www.unboundmedicine.com/medline/citation/33472518/Intron_assisted_viroid_based_production_of_insecticidal_circular_double_stranded_RNA_in_Escherichia_coli_ DB - PRIME DP - Unbound Medicine ER -