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PLCG2 is associated with the inflammatory response and is induced by amyloid plaques in Alzheimer's disease.
Genome Med. 2022 02 18; 14(1):17.GM

Abstract

BACKGROUND

Alzheimer's disease (AD) is characterized by robust microgliosis and phenotypic changes that accompany disease pathogenesis. Accumulating evidence from genetic studies suggests the importance of phospholipase C γ 2 (PLCG2) in late-onset AD (LOAD) pathophysiology. However, the role of PLCG2 in AD is still poorly understood.

METHODS

Using bulk RNA-Seq (N=1249) data from the Accelerating Medicines Partnership-Alzheimer's Disease Consortium (AMP-AD), we investigated whether PLCG2 expression increased in the brains of LOAD patients. We also evaluated the relationship between PLCG2 expression levels, amyloid plaque density, and expression levels of microglia specific markers (AIF1 and TMEM119). Finally, we investigated the longitudinal changes of PLCG2 expression in the 5xFAD mouse model of AD. To further understand the role of PLCG2 in different signaling pathways, differential gene expression and co-expression network analyses were performed using bulk RNA-Seq and microglial single-cell RNA-Seq data. To substantiate the human analyses, we performed differential gene expression analysis on wild-type (WT) and inactivated Plcg2 mice and used immunostaining to determine if the differentially expressed genes/pathways were altered by microglial cell coverage or morphology.

RESULTS

We observed significant upregulation of PLCG2 expression in three brain regions of LOAD patients and significant positive correlation of PLCG2 expression with amyloid plaque density. These findings in the human brain were validated in the 5xFAD amyloid mouse model, which showed disease progression-dependent increases in Plcg2 expression associated with amyloid pathology. Of note, increased Plcg2 expression levels in 5xFAD mice were abolished by reducing microglia. Furthermore, using bulk RNA-Seq data, we performed differential expression analysis by comparing cognitively normal older adults (CN) with 75th percentile (high) and 25th percentile (low) PLCG2 gene expression levels to identify pathways related to inflammation and the inflammatory response. The findings in the human brain were validated by differential expression analyses between WT and plcg2 inactivated mice. PLCG2 co-expression network analysis of microglial single-cell RNA-Seq data identified pathways related to the inflammatory response including regulation of I-kappaB/NF-kappa B signaling and response to lipopolysaccharide.

CONCLUSIONS

Our results provide further evidence that PLCG2 plays an important role in AD pathophysiology and may be a potential target for microglia-targeted AD therapies.

Authors+Show Affiliations

Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA.Department of Medical and Molecular Genetics, Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN, USA.Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA.Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA.Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA. Northeast Ohio Medical University, Rootstown, OH, USA.Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA.Department of Medical and Molecular Genetics, Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN, USA.Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA. Department of Radiology & Imaging Sciences, Indiana University School of Medicine, Indianapolis, IN, USA.Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA. Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA.Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA. Department of Anatomy and Cell Biology, Indiana University School of Medicine, Indianapolis, IN, USA.Stark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, IN, USA. sbissel@iu.edu. Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA. sbissel@iu.edu.Department of Radiology & Imaging Sciences, Indiana University School of Medicine, Indianapolis, IN, USA. knho@iupui.edu.

Pub Type(s)

Journal Article
Research Support, N.I.H., Extramural

Language

eng

PubMed ID

35180881

Citation

Tsai, Andy P., et al. "PLCG2 Is Associated With the Inflammatory Response and Is Induced By Amyloid Plaques in Alzheimer's Disease." Genome Medicine, vol. 14, no. 1, 2022, p. 17.
Tsai AP, Dong C, Lin PB, et al. PLCG2 is associated with the inflammatory response and is induced by amyloid plaques in Alzheimer's disease. Genome Med. 2022;14(1):17.
Tsai, A. P., Dong, C., Lin, P. B., Messenger, E. J., Casali, B. T., Moutinho, M., Liu, Y., Oblak, A. L., Lamb, B. T., Landreth, G. E., Bissel, S. J., & Nho, K. (2022). PLCG2 is associated with the inflammatory response and is induced by amyloid plaques in Alzheimer's disease. Genome Medicine, 14(1), 17. https://doi.org/10.1186/s13073-022-01022-0
Tsai AP, et al. PLCG2 Is Associated With the Inflammatory Response and Is Induced By Amyloid Plaques in Alzheimer's Disease. Genome Med. 2022 02 18;14(1):17. PubMed PMID: 35180881.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - PLCG2 is associated with the inflammatory response and is induced by amyloid plaques in Alzheimer's disease. AU - Tsai,Andy P, AU - Dong,Chuanpeng, AU - Lin,Peter Bor-Chian, AU - Messenger,Evan J, AU - Casali,Brad T, AU - Moutinho,Miguel, AU - Liu,Yunlong, AU - Oblak,Adrian L, AU - Lamb,Bruce T, AU - Landreth,Gary E, AU - Bissel,Stephanie J, AU - Nho,Kwangsik, Y1 - 2022/02/18/ PY - 2021/08/09/received PY - 2022/02/07/accepted PY - 2022/2/19/entrez PY - 2022/2/20/pubmed PY - 2022/4/19/medline KW - Alzheimer’s disease KW - Co-expression network analysis KW - Inflammatory response KW - Microglia KW - PLCG2 KW - Single-cell RNA-Seq analysis SP - 17 EP - 17 JF - Genome medicine JO - Genome Med VL - 14 IS - 1 N2 - BACKGROUND: Alzheimer's disease (AD) is characterized by robust microgliosis and phenotypic changes that accompany disease pathogenesis. Accumulating evidence from genetic studies suggests the importance of phospholipase C γ 2 (PLCG2) in late-onset AD (LOAD) pathophysiology. However, the role of PLCG2 in AD is still poorly understood. METHODS: Using bulk RNA-Seq (N=1249) data from the Accelerating Medicines Partnership-Alzheimer's Disease Consortium (AMP-AD), we investigated whether PLCG2 expression increased in the brains of LOAD patients. We also evaluated the relationship between PLCG2 expression levels, amyloid plaque density, and expression levels of microglia specific markers (AIF1 and TMEM119). Finally, we investigated the longitudinal changes of PLCG2 expression in the 5xFAD mouse model of AD. To further understand the role of PLCG2 in different signaling pathways, differential gene expression and co-expression network analyses were performed using bulk RNA-Seq and microglial single-cell RNA-Seq data. To substantiate the human analyses, we performed differential gene expression analysis on wild-type (WT) and inactivated Plcg2 mice and used immunostaining to determine if the differentially expressed genes/pathways were altered by microglial cell coverage or morphology. RESULTS: We observed significant upregulation of PLCG2 expression in three brain regions of LOAD patients and significant positive correlation of PLCG2 expression with amyloid plaque density. These findings in the human brain were validated in the 5xFAD amyloid mouse model, which showed disease progression-dependent increases in Plcg2 expression associated with amyloid pathology. Of note, increased Plcg2 expression levels in 5xFAD mice were abolished by reducing microglia. Furthermore, using bulk RNA-Seq data, we performed differential expression analysis by comparing cognitively normal older adults (CN) with 75th percentile (high) and 25th percentile (low) PLCG2 gene expression levels to identify pathways related to inflammation and the inflammatory response. The findings in the human brain were validated by differential expression analyses between WT and plcg2 inactivated mice. PLCG2 co-expression network analysis of microglial single-cell RNA-Seq data identified pathways related to the inflammatory response including regulation of I-kappaB/NF-kappa B signaling and response to lipopolysaccharide. CONCLUSIONS: Our results provide further evidence that PLCG2 plays an important role in AD pathophysiology and may be a potential target for microglia-targeted AD therapies. SN - 1756-994X UR - https://www.unboundmedicine.com/medline/citation/35180881/PLCG2_is_associated_with_the_inflammatory_response_and_is_induced_by_amyloid_plaques_in_Alzheimer's_disease_ DB - PRIME DP - Unbound Medicine ER -