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Evaluation of entropy and fractal dimension as biomarkers for tumor growth and treatment response using cellular automata.
J Theor Biol. 2023 May 07; 564:111462.JT

Abstract

Cell-based models provide a helpful approach for simulating complex systems that exhibit adaptive, resilient qualities, such as cancer. Their focus on individual cell interactions makes them a particularly appropriate strategy to study cancer therapies' effects, which are often designed to disrupt single-cell dynamics. In this work, we propose them as viable methods for studying the time evolution of cancer imaging biomarkers (IBM). We propose a cellular automata model for tumor growth and three different therapies: chemotherapy, radiotherapy, and immunotherapy, following well-established modeling procedures documented in the literature. The model generates a sequence of tumor images, from which a time series of two biomarkers: entropy and fractal dimension, is obtained. Our model shows that the fractal dimension increased faster at the onset of cancer cell dissemination. At the same time, entropy was more responsive to changes induced in the tumor by the different therapy modalities. These observations suggest that the prognostic value of the proposed biomarkers could vary considerably with time. Thus, it is essential to assess their use at different stages of cancer and for different imaging modalities. Another observation derived from the results was that both biomarkers varied slowly when the applied therapy attacked cancer cells scattered along the automatons' area, leaving multiple independent clusters of cells at the end of the treatment. Thus, patterns of change of simulated biomarkers time series could reflect on essential qualities of the spatial action of a given cancer intervention.

Authors+Show Affiliations

IIMAS, Unidad Académica de Yucatán, Universidad Nacional Autónoma de México (UNAM), Yuc., Mexico.IIMAS, Unidad Académica de Yucatán, Universidad Nacional Autónoma de México (UNAM), Yuc., Mexico.IIMAS, Unidad Académica de Yucatán, Universidad Nacional Autónoma de México (UNAM), Yuc., Mexico. Electronic address: yuriria.cortes@iimas.unam.mx.

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

36921839

Citation

Legaria-Peña, Juan Uriel, et al. "Evaluation of Entropy and Fractal Dimension as Biomarkers for Tumor Growth and Treatment Response Using Cellular Automata." Journal of Theoretical Biology, vol. 564, 2023, p. 111462.
Legaria-Peña JU, Sánchez-Morales F, Cortés-Poza Y. Evaluation of entropy and fractal dimension as biomarkers for tumor growth and treatment response using cellular automata. J Theor Biol. 2023;564:111462.
Legaria-Peña, J. U., Sánchez-Morales, F., & Cortés-Poza, Y. (2023). Evaluation of entropy and fractal dimension as biomarkers for tumor growth and treatment response using cellular automata. Journal of Theoretical Biology, 564, 111462. https://doi.org/10.1016/j.jtbi.2023.111462
Legaria-Peña JU, Sánchez-Morales F, Cortés-Poza Y. Evaluation of Entropy and Fractal Dimension as Biomarkers for Tumor Growth and Treatment Response Using Cellular Automata. J Theor Biol. 2023 May 7;564:111462. PubMed PMID: 36921839.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Evaluation of entropy and fractal dimension as biomarkers for tumor growth and treatment response using cellular automata. AU - Legaria-Peña,Juan Uriel, AU - Sánchez-Morales,Félix, AU - Cortés-Poza,Yuriria, Y1 - 2023/03/14/ PY - 2022/11/30/received PY - 2023/2/16/revised PY - 2023/3/3/accepted PY - 2023/3/28/medline PY - 2023/3/16/pubmed PY - 2023/3/15/entrez KW - Avascular tumor modeling KW - Cellular automata KW - Complex systems KW - Fractal dimension KW - Imaging biomarkers KW - Shannon entropy SP - 111462 EP - 111462 JF - Journal of theoretical biology JO - J Theor Biol VL - 564 N2 - Cell-based models provide a helpful approach for simulating complex systems that exhibit adaptive, resilient qualities, such as cancer. Their focus on individual cell interactions makes them a particularly appropriate strategy to study cancer therapies' effects, which are often designed to disrupt single-cell dynamics. In this work, we propose them as viable methods for studying the time evolution of cancer imaging biomarkers (IBM). We propose a cellular automata model for tumor growth and three different therapies: chemotherapy, radiotherapy, and immunotherapy, following well-established modeling procedures documented in the literature. The model generates a sequence of tumor images, from which a time series of two biomarkers: entropy and fractal dimension, is obtained. Our model shows that the fractal dimension increased faster at the onset of cancer cell dissemination. At the same time, entropy was more responsive to changes induced in the tumor by the different therapy modalities. These observations suggest that the prognostic value of the proposed biomarkers could vary considerably with time. Thus, it is essential to assess their use at different stages of cancer and for different imaging modalities. Another observation derived from the results was that both biomarkers varied slowly when the applied therapy attacked cancer cells scattered along the automatons' area, leaving multiple independent clusters of cells at the end of the treatment. Thus, patterns of change of simulated biomarkers time series could reflect on essential qualities of the spatial action of a given cancer intervention. SN - 1095-8541 UR - https://www.unboundmedicine.com/medline/citation/36921839/Evaluation_of_entropy_and_fractal_dimension_as_biomarkers_for_tumor_growth_and_treatment_response_using_cellular_automata_ DB - PRIME DP - Unbound Medicine ER -