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Interaction of intronic boundaries is required for the second splicing step efficiency of a group II intron.
EMBO J. 1993 Dec 15; 12(13):5173-80.EJ

Abstract

Group II and nuclear pre-mRNAs introns share a common splicing pathway involving a lariat intermediate, as well as some primary sequence similarities at the splice junctions. In this work, we analyze the role of the conserved nucleotides at the first and penultimate positions (G1 and A886) of a group II self-splicing intron. We show that the G1 nucleotide is essential for the efficiency of both the first and the second splicing steps, while substitutions at the penultimate nucleotide affect mostly the efficiency of the second step. A reciprocal suppression of the second splicing step defect can be observed in some double mutants. This result is best explained by a non-Watson-Crick interaction between the first and the penultimate nucleotides of the intron, which occurs after lariat formation. The finding that an interaction between intron boundaries is required for the second splicing step in both group II and nuclear pre-mRNA introns strengthens the idea that both systems employ similar mechanisms, albeit with differences in the details of the nucleotide interactions.

Authors+Show Affiliations

Unité de Génétique Moléculaire des Levures (URA 1149 du CNRS), Département de Biologie Moléculaire, Institut Pasteur, Paris, France.No affiliation info available

Pub Type(s)

Journal Article
Research Support, Non-U.S. Gov't

Language

eng

PubMed ID

8262060

Citation

Chanfreau, G, and A Jacquier. "Interaction of Intronic Boundaries Is Required for the Second Splicing Step Efficiency of a Group II Intron." The EMBO Journal, vol. 12, no. 13, 1993, pp. 5173-80.
Chanfreau G, Jacquier A. Interaction of intronic boundaries is required for the second splicing step efficiency of a group II intron. EMBO J. 1993;12(13):5173-80.
Chanfreau, G., & Jacquier, A. (1993). Interaction of intronic boundaries is required for the second splicing step efficiency of a group II intron. The EMBO Journal, 12(13), 5173-80.
Chanfreau G, Jacquier A. Interaction of Intronic Boundaries Is Required for the Second Splicing Step Efficiency of a Group II Intron. EMBO J. 1993 Dec 15;12(13):5173-80. PubMed PMID: 8262060.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Interaction of intronic boundaries is required for the second splicing step efficiency of a group II intron. AU - Chanfreau,G, AU - Jacquier,A, PY - 1993/12/15/pubmed PY - 1993/12/15/medline PY - 1993/12/15/entrez SP - 5173 EP - 80 JF - The EMBO journal JO - EMBO J VL - 12 IS - 13 N2 - Group II and nuclear pre-mRNAs introns share a common splicing pathway involving a lariat intermediate, as well as some primary sequence similarities at the splice junctions. In this work, we analyze the role of the conserved nucleotides at the first and penultimate positions (G1 and A886) of a group II self-splicing intron. We show that the G1 nucleotide is essential for the efficiency of both the first and the second splicing steps, while substitutions at the penultimate nucleotide affect mostly the efficiency of the second step. A reciprocal suppression of the second splicing step defect can be observed in some double mutants. This result is best explained by a non-Watson-Crick interaction between the first and the penultimate nucleotides of the intron, which occurs after lariat formation. The finding that an interaction between intron boundaries is required for the second splicing step in both group II and nuclear pre-mRNA introns strengthens the idea that both systems employ similar mechanisms, albeit with differences in the details of the nucleotide interactions. SN - 0261-4189 UR - https://www.unboundmedicine.com/medline/citation/8262060/Interaction_of_intronic_boundaries_is_required_for_the_second_splicing_step_efficiency_of_a_group_II_intron_ L2 - https://onlinelibrary.wiley.com/resolve/openurl?genre=article&sid=nlm:pubmed&issn=0261-4189&date=1993&volume=12&issue=13&spage=5173 DB - PRIME DP - Unbound Medicine ER -