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Crystal structure of GCN4-pIQI, a trimeric coiled coil with buried polar residues.
J Mol Biol. 1998 Dec 11; 284(4):859-65.JM

Abstract

Coiled coils consist of two or more alpha-helices wrapped around each other with a superhelical twist. The interfaces between helices of a coiled coil are formed by hydrophobic amino acid residues packed in a "knobs-into-holes" arrangement. Most naturally occurring coiled coils, however, also contain buried polar residues, as do the cores of the majority of naturally occurring globular proteins. Two common buried polar residues in both dimeric and trimeric coiled coils are asparagine and glutamine. In dimeric coiled coils, buried asparagine, but not glutamine, residues have been shown to confer specificity of oligomerization. We have placed a glutamine residue in the otherwise hydrophobic interior of a stable trimeric coiled coil, GCN4-pII, to study the effect of this buried polar residue in a trimeric coiled-coil environment. The resulting peptide, GCN4-pIQI, is a discrete, trimeric coiled coil with a lower stability than GCN4-pII. The crystal structure determined to 1.8 A shows that GCN4-pIQI is a trimeric coiled coil with a chloride ion coordinated by one buried glutamine residue from each monomer.

Authors+Show Affiliations

Massachusetts Institute of Technology, Cambridge, MA, 02142, USA.No affiliation info availableNo affiliation info available

Pub Type(s)

Journal Article
Research Support, U.S. Gov't, P.H.S.

Language

eng

PubMed ID

9837709

Citation

Eckert, D M., et al. "Crystal Structure of GCN4-pIQI, a Trimeric Coiled Coil With Buried Polar Residues." Journal of Molecular Biology, vol. 284, no. 4, 1998, pp. 859-65.
Eckert DM, Malashkevich VN, Kim PS. Crystal structure of GCN4-pIQI, a trimeric coiled coil with buried polar residues. J Mol Biol. 1998;284(4):859-65.
Eckert, D. M., Malashkevich, V. N., & Kim, P. S. (1998). Crystal structure of GCN4-pIQI, a trimeric coiled coil with buried polar residues. Journal of Molecular Biology, 284(4), 859-65.
Eckert DM, Malashkevich VN, Kim PS. Crystal Structure of GCN4-pIQI, a Trimeric Coiled Coil With Buried Polar Residues. J Mol Biol. 1998 Dec 11;284(4):859-65. PubMed PMID: 9837709.
* Article titles in AMA citation format should be in sentence-case
TY - JOUR T1 - Crystal structure of GCN4-pIQI, a trimeric coiled coil with buried polar residues. AU - Eckert,D M, AU - Malashkevich,V N, AU - Kim,P S, PY - 1998/12/5/pubmed PY - 1998/12/5/medline PY - 1998/12/5/entrez SP - 859 EP - 65 JF - Journal of molecular biology JO - J Mol Biol VL - 284 IS - 4 N2 - Coiled coils consist of two or more alpha-helices wrapped around each other with a superhelical twist. The interfaces between helices of a coiled coil are formed by hydrophobic amino acid residues packed in a "knobs-into-holes" arrangement. Most naturally occurring coiled coils, however, also contain buried polar residues, as do the cores of the majority of naturally occurring globular proteins. Two common buried polar residues in both dimeric and trimeric coiled coils are asparagine and glutamine. In dimeric coiled coils, buried asparagine, but not glutamine, residues have been shown to confer specificity of oligomerization. We have placed a glutamine residue in the otherwise hydrophobic interior of a stable trimeric coiled coil, GCN4-pII, to study the effect of this buried polar residue in a trimeric coiled-coil environment. The resulting peptide, GCN4-pIQI, is a discrete, trimeric coiled coil with a lower stability than GCN4-pII. The crystal structure determined to 1.8 A shows that GCN4-pIQI is a trimeric coiled coil with a chloride ion coordinated by one buried glutamine residue from each monomer. SN - 0022-2836 UR - https://www.unboundmedicine.com/medline/citation/9837709/Crystal_structure_of_GCN4_pIQI_a_trimeric_coiled_coil_with_buried_polar_residues_ L2 - https://linkinghub.elsevier.com/retrieve/pii/S0022-2836(98)92214-8 DB - PRIME DP - Unbound Medicine ER -